Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6ZE87_CIOINUncharacterized protein. (169 aa)    
Predicted Functional Partners:
ci-ndk/dpy26
Radial spoke protein NDK/DPY26; Belongs to the NDK family.
    
  0.929
LOC101242578
Caltractin.
    
 0.614
LOC100177416
Sperm-associated antigen 8-like.
  
   0.605
LOC100184622
TPR_REGION domain-containing protein.
   
   0.597
F6SY22_CIOIN
Uncharacterized protein.
   
  0.594
LOC100184287
Uncharacterized protein.
   
 0.592
ciic3
Thioredoxin domain-containing protein 3 homolog; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity).
    
 0.589
LOC100180914
Testis-expressed protein 43-like isoform X1.
    
 
 0.581
LOC100177721
WD_REPEATS_REGION domain-containing protein.
   
  0.567
LOC100176509
Zinc finger MYND domain-containing protein 12.
    
 
 0.559
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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