Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
L7N0S6_CIOINSignal peptidase complex catalytic subunit SEC11. (182 aa)    
Predicted Functional Partners:
LOC100178515
Probable signal peptidase complex subunit 2.
   
 0.996
LOC100184661
Signal peptidase complex subunit 3.
   
 0.994
LOC100183780
Signal peptidase complex catalytic subunit SEC11.
  
  
 
0.900
LOC100177778
DNA-directed RNA polymerase II subunit RPB7.
 
 
    0.865
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.781
F6ZD57_CIOIN
Peptidase_S9 domain-containing protein.
   
 
 0.622
F6ZCY0_CIOIN
DPPIV_N domain-containing protein.
   
 
 0.622
LOC100179323
J domain-containing protein.
   
 
 0.576
LOC108950015
Mitochondrial inner membrane protease subunit 2-like.
     
 0.563
LOC100186321
Mitochondrial inner membrane protease subunit.
     
 0.556
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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