STRINGSTRING
ENSCING00000006216 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006216" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006216Uncharacterized protein (547 aa)    
Predicted Functional Partners:
ENSCING00000002604
Uncharacterized protein (398 aa)
   
   
  0.597
Cin.31373
Uncharacterized protein (344 aa)
   
   
  0.597
ENSCING00000008276
Uncharacterized protein (349 aa)
         
  0.593
ENSCING00000002999
Uncharacterized protein (599 aa)
   
   
  0.574
ENSCING00000018117
Uncharacterized protein (283 aa)
           
  0.549
ENSCING00000019075
Uncharacterized protein (297 aa)
           
  0.549
ENSCING00000002165
Uncharacterized protein (238 aa)
         
  0.518
ENSCING00000020840
Uncharacterized protein (176 aa)
   
   
  0.514
ENSCING00000002702
Uncharacterized protein (196 aa)
   
   
  0.514
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
           
  0.482
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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