STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6YW68_CIOINAmino_oxidase domain-containing protein. (547 aa)    
Predicted Functional Partners:
H2Y1R1_CIOIN
Uncharacterized protein.
  
 
 0.967
LOC100183886
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.652
LOC100180451
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
  
  
 0.558
F6SSS9_CIOIN
Nudix hydrolase domain-containing protein.
  
  
 0.536
F6QHP8_CIOIN
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
  
 0.534
LOC100178794
Uncharacterized protein.
  
 
 0.519
H2Y1A2_CIOIN
Uncharacterized protein.
  
 
 0.519
LOC100181774
Cytochrome b5 heme-binding domain-containing protein.
    
 0.502
F6Z0U1_CIOIN
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
     
 0.485
F6Z7S0_CIOIN
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
     
 0.475
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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