Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100183552ANK_REP_REGION domain-containing protein. (230 aa)    
Predicted Functional Partners:
LOC100184104
PCI domain-containing protein.
    
 0.995
LOC100182082
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.992
LOC100184190
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.992
F6XKP0_CIOIN
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.991
F6QS20_CIOIN
VWFA domain-containing protein.
   
 0.990
H2XTW5_CIOIN
WD_REPEATS_REGION domain-containing protein.
    
 0.990
F6YHS8_CIOIN
PCI domain-containing protein.
    
 0.989
LOC100185096
26S proteasome regulatory subunit 7; Belongs to the AAA ATPase family.
    
 0.989
LOC100187162
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.989
H2XYW0_CIOIN
MPN domain-containing protein.
   
 0.989
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (10%) [HD]