STRINGSTRING
ci-morn40 protein (Ciona intestinalis) - STRING interaction network
"ci-morn40" - Uncharacterized protein LOC100177304 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-morn40Uncharacterized protein LOC100177304 (300 aa)    
Predicted Functional Partners:
rsp3
Radial spoke 3 protein (322 aa)
     
   
  0.598
ENSCING00000006636
Uncharacterized protein (163 aa)
   
        0.531
ci-rsp4/6
Uncharacterized protein LOC100180393 (527 aa)
     
   
  0.515
ENSCING00000020376
Uncharacterized protein (563 aa)
           
  0.450
ENSCING00000009552
Uncharacterized protein (540 aa)
           
  0.450
ci-rsp9
Uncharacterized protein LOC100179789 (276 aa)
     
   
  0.408
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (10%) [HD]