STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6VQ32_CIOINUncharacterized protein; Belongs to the GST superfamily. (198 aa)    
Predicted Functional Partners:
LOC100175706
Glutaredoxin domain-containing protein.
     
 0.908
F6SDP7_CIOIN
EGF-like domain-containing protein.
   
 
 0.905
F7AAV2_CIOIN
EGF-like domain-containing protein.
     
 0.905
F6PWH2_CIOIN
Uncharacterized protein.
     
 0.902
LOC100177610
Peroxiredoxin-6-like isoform X1.
   
 0.786
H2XQS5_CIOIN
Thioredoxin domain-containing protein.
   
 0.786
LOC100179151
Glutathione S-transferase theta-1-like.
    
 0.769
F6Y3D6_CIOIN
Uncharacterized protein; Belongs to the GST superfamily.
  
0.764
LOC100183297
Glutathione S-transferase omega-1.
   
 
 0.755
F7AV59_CIOIN
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.755
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.