STRINGSTRING
LOC494427 protein (Ciona intestinalis) - STRING interaction network
"LOC494427" - Glutathione-requiring prostaglandin D synthase-like in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC494427Glutathione-requiring prostaglandin D synthase-like (198 aa)    
Predicted Functional Partners:
Cin.23358
Uncharacterized protein (256 aa)
           
  0.572
myc
Transcription factor protein (681 aa)
           
  0.567
ENSCING00000015308
Uncharacterized protein (287 aa)
           
  0.565
ENSCING00000008811
Uncharacterized protein (357 aa)
           
  0.565
ENSCING00000015311
Uncharacterized protein (287 aa)
           
  0.565
gpx7
Glutathione peroxidase 7 precursor (190 aa)
           
  0.563
gsr
Uncharacterized protein (472 aa)
           
  0.561
ENSCING00000005187
Catalase ; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (521 aa)
           
  0.560
jun
Transcription factor protein (381 aa)
         
  0.557
Cin.45508
Uncharacterized protein (221 aa)
   
     
  0.548
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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