STRINGSTRING
ENSCING00000006260 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006260" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006260Uncharacterized protein (222 aa)    
Predicted Functional Partners:
ENSCING00000006284
Uncharacterized protein (298 aa)
 
  0.998
ENSCING00000004587
Uncharacterized protein (308 aa)
   
  0.957
ENSCING00000005769
Uncharacterized protein (253 aa)
     
  0.948
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
         
  0.683
impdh2
Inosine-5’-monophosphate dehydrogenase (384 aa)
   
 
  0.666
gmps
Uncharacterized protein (688 aa)
   
   
  0.620
ENSCING00000009202
Uncharacterized protein (489 aa)
   
   
  0.581
ENSCING00000023252
Uncharacterized protein (281 aa)
         
  0.493
ENSCING00000022142
Uncharacterized protein (504 aa)
         
  0.493
ENSCING00000022062
Uncharacterized protein (425 aa)
   
   
  0.442
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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