Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6REQ0_CIOINMFS domain-containing protein. (502 aa)    
Predicted Functional Partners:
F6YP95_CIOIN
Guanylate kinase-like domain-containing protein.
      
 0.820
F6QSJ0_CIOIN
Uncharacterized protein.
      
 0.693
F7B496_CIOIN
Phosducin domain-containing protein.
 
      0.681
H2XKW6_CIOIN
MFS domain-containing protein.
      
 0.675
F7AVN5_CIOIN
MFS domain-containing protein.
      
 0.629
LOC100177213
Major facilitator superfamily domain-containing protein 1 isoform X1.
      
 0.553
F6RXS5_CIOIN
AB hydrolase-1 domain-containing protein.
      
 0.510
F6W912_CIOIN
Protein kinase domain-containing protein.
      
 0.509
LOC100177307
N-acetyltransferase 9-like protein.
      
 0.507
F6RQ34_CIOIN
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
      
 0.498
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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