Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186551CTP_transf_like domain-containing protein. (224 aa)    
Predicted Functional Partners:
LOC100186785
Uncharacterized protein.
   
 
 0.993
H2Y2E8_CIOIN
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.982
LOC100181257
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.844
LOC100180883
Tctex1 domain-containing protein 2-like.
 
   
 0.817
F6VDY1_CIOIN
Uncharacterized protein.
     
 0.805
LOC100181424
Uncharacterized protein.
    
 
 0.765
H2Y233_CIOIN
Nuclear cap-binding protein subunit 2.
   
  
 0.699
LOC100184214
F-box/SPRY domain-containing protein 1.
      
 0.690
F7AX37_CIOIN
LNS2 domain-containing protein.
      
 0.622
LOC100182203
High mobility group protein 20A.
    
   0.616
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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