STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186551CTP_transf_like domain-containing protein. (224 aa)    
Predicted Functional Partners:
LOC100186785
Uncharacterized protein.
     
 0.988
H2Y2E8_CIOIN
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.979
LOC100180883
Tctex1 domain-containing protein 2-like.
 
    
 0.812
LOC100181257
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.738
F6VDY1_CIOIN
Uncharacterized protein.
     
 0.707
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.642
F6RFK8_CIOIN
Methyltransf_11 domain-containing protein.
  
 
 0.593
F6SE92_CIOIN
TPP_enzyme_N domain-containing protein.
  
 
 0.588
LOC100178631
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.588
F6W5P0_CIOIN
TPP_enzyme_C domain-containing protein.
  
 
 0.588
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.