STRINGSTRING
Cin.28155 protein (Ciona intestinalis) - STRING interaction network
"Cin.28155" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.28155Uncharacterized protein (224 aa)    
Predicted Functional Partners:
ENSCING00000017984
Uncharacterized protein (377 aa)
     
 
  0.966
ENSCING00000007566
Uncharacterized protein (382 aa)
     
 
  0.963
ENSCING00000009202
Uncharacterized protein (489 aa)
     
 
  0.880
ENSCING00000008384
Uncharacterized protein (380 aa)
     
 
  0.679
ENSCING00000002858
Uncharacterized protein (1145 aa)
     
   
  0.545
ENSCING00000011418
Uncharacterized protein (935 aa)
     
   
  0.517
ENSCING00000002850
Uncharacterized protein (2241 aa)
         
  0.502
ENSCING00000012432
Uncharacterized protein (233 aa)
       
 
  0.477
ENSCING00000012841
Uncharacterized protein (483 aa)
   
   
  0.446
ENSCING00000008558
Uncharacterized protein (429 aa)
   
   
  0.446
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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