STRINGSTRING
polr2b protein (Ciona intestinalis) - STRING interaction network
"polr2b" - DNA-directed RNA polymerase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr2bDNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)    
Predicted Functional Partners:
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
   
  0.999
ENSCING00000021895
Uncharacterized protein (286 aa)
   
  0.998
ENSCING00000025128
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (207 aa)
 
  0.996
ENSCING00000024933
Uncharacterized protein (211 aa)
   
  0.996
ENSCING00000019533
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (225 aa)
   
  0.996
ENSCING00000007684
Uncharacterized protein (749 aa)
   
  0.996
ENSCING00000009812
Uncharacterized protein (151 aa)
   
  0.995
ENSCING00000019359
Uncharacterized protein (141 aa)
 
  0.994
ENSCING00000011417
Uncharacterized protein (152 aa)
     
  0.993
ENSCING00000011474
Uncharacterized protein (133 aa)
     
  0.992
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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