STRINGSTRING
ENSCING00000006448 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006448" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006448Uncharacterized protein (209 aa)    
Predicted Functional Partners:
ENSCING00000004877
Uncharacterized protein ; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs (164 aa)
     
  0.996
ENSCING00000002708
Uncharacterized protein (147 aa)
     
  0.984
ENSCING00000009153
Uncharacterized protein ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (202 aa)
     
      0.957
ENSCING00000005956
Uncharacterized protein (373 aa)
       
      0.957
Cin.21976
Uncharacterized protein (560 aa)
       
      0.957
ENSCING00000002661
Uncharacterized protein (586 aa)
       
      0.957
ENSCING00000007478
Uncharacterized protein (823 aa)
       
      0.874
ENSCING00000006182
Uncharacterized protein (523 aa)
       
      0.819
ENSCING00000001048
Uncharacterized protein (464 aa)
       
      0.676
ENSCING00000008396
Uncharacterized protein (197 aa)
       
  0.552
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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