Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6Q539_CIOINDAGKc domain-containing protein. (383 aa)    
Predicted Functional Partners:
F6Q8G4_CIOIN
Uncharacterized protein; Belongs to the acid ceramidase family.
     
 0.735
F6SYF4_CIOIN
Uncharacterized protein.
  
 0.730
F7A1T4_CIOIN
Uncharacterized protein.
     
 0.729
H2XP03_CIOIN
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.712
LOC100178248
3-ketodihydrosphingosine reductase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.672
F6ZPY9_CIOIN
Metallophos domain-containing protein.
    
 
 0.665
F6XUD5_CIOIN
Aminotran_1_2 domain-containing protein.
   
 
 0.652
F6V9F0_CIOIN
Aminotran_1_2 domain-containing protein.
   
 
 0.652
LOC100177471
Mannosyltransferase.
      
 0.635
F7ARL3_CIOIN
SAM domain-containing protein.
      
 0.629
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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