Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100184635Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
F7AZV0_CIOIN
Lipoyl-binding domain-containing protein.
   
 0.970
F6WR85_CIOIN
Dihydrolipoyl dehydrogenase.
  
 
 0.967
LOC100181980
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.962
LOC100186995
enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.957
LOC100180564
Peroxisomal bifunctional enzyme-like isoform X1.
  
 0.953
LOC100182913
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.953
F6TKV3_CIOIN
Transket_pyr domain-containing protein.
   
 
 0.945
F6U1L2_CIOIN
Uncharacterized protein.
  
 
0.919
LOC100186673
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.913
LOC100181154
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
0.906
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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