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pygb protein (Ciona intestinalis) - STRING interaction network
"pygb" - Phosphorylase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pygbPhosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (866 aa)    
Predicted Functional Partners:
ENSCING00000007379
Uncharacterized protein (1514 aa)
   
 
  0.999
gbe1
Uncharacterized protein (693 aa)
   
  0.996
pgm1
Uncharacterized protein (560 aa)
   
  0.993
ENSCING00000004933
Uncharacterized protein (689 aa)
   
 
  0.987
ENSCING00000009641
Uncharacterized protein (506 aa)
   
  0.971
ENSCING00000018363
Uncharacterized protein (672 aa)
   
  0.968
ENSCING00000011709
Uncharacterized protein (644 aa)
   
  0.968
ENSCING00000014534
Uncharacterized protein (673 aa)
   
  0.968
ENSCING00000005707
Uncharacterized protein (679 aa)
   
  0.968
ENSCING00000000748
Uncharacterized protein (649 aa)
   
  0.968
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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