Sepn1 protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

Sepn1

EF-hand domain-containing protein. (463 aa)

Predicted Functional Partners:

Selo

0.896

selk

0.894

sep15

0.883

Sels

0.859

LOC100181257

0.813

F7APB5_CIOIN

0.697

F7A983_CIOIN

0.693

F6UUA2_CIOIN

0.691

Txnrd3

0.685

H2XSD2_CIOIN

0.668

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6UUA2_CIOIN	F7A983_CIOIN	ENSCINP00000023238	ENSCINP00000011673	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.691
F6UUA2_CIOIN	F7APB5_CIOIN	ENSCINP00000023238	ENSCINP00000015270	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.991
F6UUA2_CIOIN	H2XSD2_CIOIN	ENSCINP00000023238	ENSCINP00000032566	Aminotran_5 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.623
F6UUA2_CIOIN	Selo	ENSCINP00000023238	ENSCINP00000005632	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.588
F6UUA2_CIOIN	Sels	ENSCINP00000023238	ENSCINP00000033789	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.742
F6UUA2_CIOIN	Sepn1	ENSCINP00000023238	ENSCINP00000013402	Aminotran_5 domain-containing protein.	EF-hand domain-containing protein.	0.691
F6UUA2_CIOIN	Txnrd3	ENSCINP00000023238	ENSCINP00000036039	Aminotran_5 domain-containing protein.	Glutaredoxin domain-containing protein.	0.918
F6UUA2_CIOIN	selk	ENSCINP00000023238	ENSCINP00000033194	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.534
F6UUA2_CIOIN	sep15	ENSCINP00000023238	ENSCINP00000031126	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.501
F7A983_CIOIN	F6UUA2_CIOIN	ENSCINP00000011673	ENSCINP00000023238	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.691
F7A983_CIOIN	F7APB5_CIOIN	ENSCINP00000011673	ENSCINP00000015270	Uncharacterized protein.	Uncharacterized protein.	0.843
F7A983_CIOIN	H2XSD2_CIOIN	ENSCINP00000011673	ENSCINP00000032566	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.913
F7A983_CIOIN	LOC100181257	ENSCINP00000011673	ENSCINP00000017096	Uncharacterized protein.	Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.469
F7A983_CIOIN	Selo	ENSCINP00000011673	ENSCINP00000005632	Uncharacterized protein.	Uncharacterized protein.	0.603
F7A983_CIOIN	Sels	ENSCINP00000011673	ENSCINP00000033789	Uncharacterized protein.	Uncharacterized protein.	0.737
F7A983_CIOIN	Sepn1	ENSCINP00000011673	ENSCINP00000013402	Uncharacterized protein.	EF-hand domain-containing protein.	0.693
F7A983_CIOIN	Txnrd3	ENSCINP00000011673	ENSCINP00000036039	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.641
F7A983_CIOIN	selk	ENSCINP00000011673	ENSCINP00000033194	Uncharacterized protein.	Uncharacterized protein.	0.517
F7A983_CIOIN	sep15	ENSCINP00000011673	ENSCINP00000031126	Uncharacterized protein.	Uncharacterized protein.	0.677
F7APB5_CIOIN	F6UUA2_CIOIN	ENSCINP00000015270	ENSCINP00000023238	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.991