Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6PG92_CIOINUncharacterized protein. (408 aa)    
Predicted Functional Partners:
LOC100182277
Argininosuccinate lyase-like.
 
 0.999
F6PHH7_CIOIN
ATP-grasp domain-containing protein.
 
 
 0.998
F6QF37_CIOIN
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.970
F6Z7L9_CIOIN
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.964
LOC100183039
Nitric oxide synthase; Produces nitric oxide (NO).
     
 0.948
LOC100180021
Glutamine amidotransferase type-2 domain-containing protein.
   
 
 0.935
LOC100185185
Asparagine synthetase [glutamine-hydrolyzing].
   
 
 0.935
LOC100184965
Aspartate aminotransferase.
   
 
 0.935
LOC100179315
Aspartate aminotransferase.
   
 
 0.927
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.907
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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