STRINGSTRING
ENSCING00000006610 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006610" - 60S ribosome subunit biogenesis protein NIP7 homolog in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING0000000661060S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)    
Predicted Functional Partners:
ENSCING00000008548
Uncharacterized protein (682 aa)
   
 
  0.994
ENSCING00000013374
Uncharacterized protein (177 aa)
     
 
  0.993
ENSCING00000001858
Uncharacterized protein (225 aa)
     
 
  0.992
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
 
  0.992
ENSCING00000001695
Uncharacterized protein (264 aa)
     
 
  0.989
ENSCING00000007514
Uncharacterized protein (351 aa)
     
 
  0.989
ENSCING00000000481
Uncharacterized protein (226 aa)
     
 
  0.988
ENSCING00000009238
Uncharacterized protein (834 aa)
     
 
  0.988
ENSCING00000017577
Uncharacterized protein (240 aa)
   
 
  0.987
ENSCING00000001117
Uncharacterized protein (141 aa)
   
 
  0.987
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]