STRINGSTRING
ci-vp-r protein (Ciona intestinalis) - STRING interaction network
"ci-vp-r" - Vasopressin/oxytocin-related peptide receptor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-vp-rVasopressin/oxytocin-related peptide receptor (404 aa)    
Predicted Functional Partners:
tkr
Tachykinin receptor (352 aa)
         
  0.749
ENSCING00000020287
Guanine nucleotide-binding protein subunit gamma ; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (67 aa)
       
  0.683
cigq
Uncharacterized protein (362 aa)
       
  0.678
ciarr
Arrestin (253 aa)
       
  0.660
ENSCING00000003768
Uncharacterized protein (347 aa)
       
    0.659
ENSCING00000002073
Uncharacterized protein (906 aa)
       
  0.648
ENSCING00000013958
Uncharacterized protein (737 aa)
       
  0.646
ENSCING00000018199
Uncharacterized protein (837 aa)
     
  0.640
ENSCING00000019266
Uncharacterized protein (508 aa)
     
 
  0.633
ENSCING00000025018
Uncharacterized protein (430 aa)
     
 
  0.633
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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