Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6QP05_CIOING_PROTEIN_RECEP_F1_2 domain-containing protein. (291 aa)    
Predicted Functional Partners:
H2XYP6_CIOIN
Uncharacterized protein.
    
 
 0.808
F6VVB7_CIOIN
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
      
 0.713
F6ZJZ6_CIOIN
Uncharacterized protein.
     
 0.639
LOC100185405
Guanine nucleotide-binding protein G(S) subunit alpha-like.
    
 0.581
LOC104266020
Uncharacterized protein.
    
 0.581
F6TNP4_CIOIN
Uncharacterized protein.
      
 0.559
F6SDP7_CIOIN
EGF-like domain-containing protein.
      
 0.535
F7AAV2_CIOIN
EGF-like domain-containing protein.
      
 0.535
LOC100180455
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
      
 0.517
H2Y0S6_CIOIN
Uncharacterized protein.
      
 0.511
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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