Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC100180098phytanoyl-CoA dioxygenase, peroxisomal-like. (329 aa)    
Predicted Functional Partners:
H2XZN8_CIOIN
WD_REPEATS_REGION domain-containing protein.
    
 0.934
H2XZX7_CIOIN
Uncharacterized protein.
     
 
0.900
LOC100175580
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
   
 0.732
LOC100180448
Peroxisomal membrane protein PEX14-like isoform X1.
     
 0.726
LOC100180056
Long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X3.
      
 0.698
F7B8G2_CIOIN
TPR_REGION domain-containing protein.
     
 0.694
H2XYD5_CIOIN
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.687
LOC100179603
Putative deoxyribonuclease TATDN3.
      
 0.671
F6RC16_CIOIN
ATPase_AAA_core domain-containing protein.
      
 0.634
F6ZFI0_CIOIN
Uncharacterized protein.
      
 0.584
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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