STRINGSTRING
atf2/7 protein (Ciona intestinalis) - STRING interaction network
"atf2/7" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf2/7Transcription factor protein (631 aa)    
Predicted Functional Partners:
jun
Transcription factor protein (381 aa)
     
0.968
erk1/2
Mitogen-activated protein kinase (350 aa)
       
  0.891
erk5
Mitogen-activated protein kinase (820 aa)
       
  0.880
ENSCING00000001478
Uncharacterized protein (364 aa)
       
  0.868
erk3/4
Mitogen-activated protein kinase (906 aa)
       
  0.868
jnk
C-jun N-terminal kinase (437 aa)
       
  0.846
ENSCING00000006174
Zinc finger protein (645 aa)
     
 
  0.627
ENSCING00000001161
Uncharacterized protein ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (121 aa)
       
    0.620
creb/atf-c
Transcription factor Ci-CREB/ATF-c (298 aa)
       
  0.605
ENSCING00000022852
Uncharacterized protein (568 aa)
       
 
  0.581
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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