STRINGSTRING
ENSCING00000006652 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006652" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006652Uncharacterized protein (954 aa)    
Predicted Functional Partners:
ENSCING00000023332
Uncharacterized protein (168 aa)
     
  0.956
ENSCING00000007870
Uncharacterized protein (181 aa)
     
  0.946
ENSCING00000012260
Uncharacterized protein (217 aa)
     
  0.907
ENSCING00000009074
Uncharacterized protein (170 aa)
     
  0.907
e(y)2
Enhancer of yellow 2 transcription factor homolog ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 [...] (104 aa)
       
 
  0.844
zf(rbz)-2
Zinc finger protein (1304 aa)
     
 
  0.800
ENSCING00000007364
Uncharacterized protein (1190 aa)
     
 
  0.798
ENSCING00000021893
Uncharacterized protein (236 aa)
     
 
  0.789
ENSCING00000009550
Uncharacterized protein (236 aa)
     
 
  0.789
ENSCING00000006008
Uncharacterized protein (367 aa)
       
 
  0.781
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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