F6U088_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

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gene fusions

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[Homology]

Score

F6U088_CIOIN

Uncharacterized protein. (441 aa)

Predicted Functional Partners:

H2XYD3_CIOIN

0.984

H2XPU1_CIOIN

0.894

LOC100185663

0.872

LOC100182198

0.856

LOC100176155

0.812

LOC100186201

0.805

H2XNV5_CIOIN

0.777

H2XZ02_CIOIN

0.762

F6Z0T1_CIOIN

0.751

F6SBT6_CIOIN

0.743

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SBT6_CIOIN	F6U088_CIOIN	ENSCINP00000002380	ENSCINP00000013640	Uncharacterized protein.	Uncharacterized protein.	0.743
F6SBT6_CIOIN	LOC100176155	ENSCINP00000002380	ENSCINP00000019390	Uncharacterized protein.	Uncharacterized protein.	0.582
F6SBT6_CIOIN	LOC100185663	ENSCINP00000002380	ENSCINP00000036097	Uncharacterized protein.	Vinculin.	0.712
F6U088_CIOIN	F6SBT6_CIOIN	ENSCINP00000013640	ENSCINP00000002380	Uncharacterized protein.	Uncharacterized protein.	0.743
F6U088_CIOIN	F6Z0T1_CIOIN	ENSCINP00000013640	ENSCINP00000008420	Uncharacterized protein.	Uncharacterized protein.	0.751
F6U088_CIOIN	H2XNV5_CIOIN	ENSCINP00000013640	ENSCINP00000031338	Uncharacterized protein.	Uncharacterized protein.	0.777
F6U088_CIOIN	H2XPU1_CIOIN	ENSCINP00000013640	ENSCINP00000031675	Uncharacterized protein.	WH1 domain-containing protein.	0.894
F6U088_CIOIN	H2XYD3_CIOIN	ENSCINP00000013640	ENSCINP00000034667	Uncharacterized protein.	PID domain-containing protein.	0.984
F6U088_CIOIN	H2XZ02_CIOIN	ENSCINP00000013640	ENSCINP00000034886	Uncharacterized protein.	WH1 domain-containing protein.	0.762
F6U088_CIOIN	LOC100176155	ENSCINP00000013640	ENSCINP00000019390	Uncharacterized protein.	Uncharacterized protein.	0.812
F6U088_CIOIN	LOC100182198	ENSCINP00000013640	ENSCINP00000015324	Uncharacterized protein.	Uncharacterized protein LOC100182198.	0.856
F6U088_CIOIN	LOC100185663	ENSCINP00000013640	ENSCINP00000036097	Uncharacterized protein.	Vinculin.	0.872
F6U088_CIOIN	LOC100186201	ENSCINP00000013640	ENSCINP00000033483	Uncharacterized protein.	HAUS augmin-like complex subunit 8 isoform X1.	0.805
F6Z0T1_CIOIN	F6U088_CIOIN	ENSCINP00000008420	ENSCINP00000013640	Uncharacterized protein.	Uncharacterized protein.	0.751
H2XNV5_CIOIN	F6U088_CIOIN	ENSCINP00000031338	ENSCINP00000013640	Uncharacterized protein.	Uncharacterized protein.	0.777
H2XNV5_CIOIN	LOC100176155	ENSCINP00000031338	ENSCINP00000019390	Uncharacterized protein.	Uncharacterized protein.	0.749
H2XNV5_CIOIN	LOC100185663	ENSCINP00000031338	ENSCINP00000036097	Uncharacterized protein.	Vinculin.	0.986
H2XPU1_CIOIN	F6U088_CIOIN	ENSCINP00000031675	ENSCINP00000013640	WH1 domain-containing protein.	Uncharacterized protein.	0.894
H2XPU1_CIOIN	LOC100185663	ENSCINP00000031675	ENSCINP00000036097	WH1 domain-containing protein.	Vinculin.	0.716
H2XYD3_CIOIN	F6U088_CIOIN	ENSCINP00000034667	ENSCINP00000013640	PID domain-containing protein.	Uncharacterized protein.	0.984