STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6TCT1_CIOINAnion exchange protein. (1074 aa)    
Predicted Functional Partners:
LOC100182997
33 kDa inner dynein arm light chain, axonemal.
   
  
 0.567
LOC100176001
Cytochrome b5 domain-containing protein 1-like; Belongs to the cytochrome b5 family.
   
  
 0.544
F6R824_CIOIN
PLAT domain-containing protein.
   
  
 0.537
F6RIL1_CIOIN
Uncharacterized protein.
   
    0.531
F6ZAP9_CIOIN
Uncharacterized protein.
      
 0.482
H2XVU8_CIOIN
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.481
H2XTN7_CIOIN
Uncharacterized protein.
     
 0.478
H2XNV5_CIOIN
Uncharacterized protein.
     
 0.475
F6VBC2_CIOIN
Uncharacterized protein.
      
 0.474
LOC778910
ANK_REP_REGION domain-containing protein.
    
 0.449
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.