STRINGSTRING
ENSCING00000006672 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006672" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006672Uncharacterized protein (452 aa)    
Predicted Functional Partners:
ENSCING00000001209
Uncharacterized protein (684 aa)
           
  0.582
Cin.31988
Uncharacterized protein (218 aa)
           
  0.569
ENSCING00000003410
Uncharacterized protein (277 aa)
     
   
  0.483
ccdc135
Uncharacterized protein (844 aa)
     
   
  0.454
ccdc39
Uncharacterized protein (238 aa)
     
   
  0.439
ENSCING00000015454
Uncharacterized protein (147 aa)
           
  0.439
ENSCING00000001389
Uncharacterized protein (714 aa)
           
  0.414
ciaxp83.9
Axonemal 84 kDa protein (735 aa)
           
  0.412
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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