LOC100184101 protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene fusions

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[Homology]

Score

LOC100184101

Uncharacterized protein. (488 aa)

Predicted Functional Partners:

H2XJI3_CIOIN

0.995

H2XJM4_CIOIN

0.986

F7AAC1_CIOIN

0.967

F6QVH1_CIOIN

0.950

LOC100177488

0.948

F6Y1N2_CIOIN

0.945

F6W453_CIOIN

0.943

LOC100176960

0.928

F6W8G0_CIOIN

0.928

F6RKQ2_CIOIN

0.924

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QVH1_CIOIN	F6RKQ2_CIOIN	ENSCINP00000013541	ENSCINP00000013154	Uncharacterized protein.	Uncharacterized protein.	0.910
F6QVH1_CIOIN	F6W453_CIOIN	ENSCINP00000013541	ENSCINP00000016360	Uncharacterized protein.	Uncharacterized protein.	0.935
F6QVH1_CIOIN	F6W8G0_CIOIN	ENSCINP00000013541	ENSCINP00000019657	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.989
F6QVH1_CIOIN	F6Y1N2_CIOIN	ENSCINP00000013541	ENSCINP00000011728	Uncharacterized protein.	PSP domain-containing protein.	0.971
F6QVH1_CIOIN	F7AAC1_CIOIN	ENSCINP00000013541	ENSCINP00000016207	Uncharacterized protein.	MFAP1 domain-containing protein.	0.798
F6QVH1_CIOIN	H2XJI3_CIOIN	ENSCINP00000013541	ENSCINP00000029815	Uncharacterized protein.	FHA domain-containing protein.	0.799
F6QVH1_CIOIN	H2XJM4_CIOIN	ENSCINP00000013541	ENSCINP00000029856	Uncharacterized protein.	G-patch domain-containing protein.	0.998
F6QVH1_CIOIN	LOC100176960	ENSCINP00000013541	ENSCINP00000010465	Uncharacterized protein.	Uncharacterized protein.	0.941
F6QVH1_CIOIN	LOC100177488	ENSCINP00000013541	ENSCINP00000003205	Uncharacterized protein.	Protein BUD31 homolog.	0.910
F6QVH1_CIOIN	LOC100184101	ENSCINP00000013541	ENSCINP00000013727	Uncharacterized protein.	Uncharacterized protein.	0.950
F6RKQ2_CIOIN	F6QVH1_CIOIN	ENSCINP00000013154	ENSCINP00000013541	Uncharacterized protein.	Uncharacterized protein.	0.910
F6RKQ2_CIOIN	F6W453_CIOIN	ENSCINP00000013154	ENSCINP00000016360	Uncharacterized protein.	Uncharacterized protein.	0.999
F6RKQ2_CIOIN	F6W8G0_CIOIN	ENSCINP00000013154	ENSCINP00000019657	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.964
F6RKQ2_CIOIN	F6Y1N2_CIOIN	ENSCINP00000013154	ENSCINP00000011728	Uncharacterized protein.	PSP domain-containing protein.	0.897
F6RKQ2_CIOIN	H2XJI3_CIOIN	ENSCINP00000013154	ENSCINP00000029815	Uncharacterized protein.	FHA domain-containing protein.	0.739
F6RKQ2_CIOIN	H2XJM4_CIOIN	ENSCINP00000013154	ENSCINP00000029856	Uncharacterized protein.	G-patch domain-containing protein.	0.538
F6RKQ2_CIOIN	LOC100176960	ENSCINP00000013154	ENSCINP00000010465	Uncharacterized protein.	Uncharacterized protein.	0.950
F6RKQ2_CIOIN	LOC100177488	ENSCINP00000013154	ENSCINP00000003205	Uncharacterized protein.	Protein BUD31 homolog.	0.954
F6RKQ2_CIOIN	LOC100184101	ENSCINP00000013154	ENSCINP00000013727	Uncharacterized protein.	Uncharacterized protein.	0.924
F6W453_CIOIN	F6QVH1_CIOIN	ENSCINP00000016360	ENSCINP00000013541	Uncharacterized protein.	Uncharacterized protein.	0.935