STRINGSTRING
ENSCING00000021769 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000021769" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000021769Uncharacterized protein (311 aa)    
Predicted Functional Partners:
ENSCING00000012408
Uncharacterized protein (248 aa)
 
          0.529
ENSCING00000006694
Uncharacterized protein (236 aa)
 
          0.526
ENSCING00000006695
Uncharacterized protein (238 aa)
 
          0.523
ENSCING00000012409
Uncharacterized protein (253 aa)
 
          0.522
dpyd
Uncharacterized protein (1024 aa)
     
   
  0.468
ENSCING00000004181
Uncharacterized protein (474 aa)
     
 
  0.455
ENSCING00000023656
Uncharacterized protein (520 aa)
           
  0.435
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
           
  0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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