STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186199N-alpha-acetyltransferase 10. (219 aa)    
Predicted Functional Partners:
H2XJN3_CIOIN
N-acetyltransferase domain-containing protein.
   
 0.996
F7B5P4_CIOIN
Uncharacterized protein.
    
 0.995
LOC104265533
Uncharacterized protein.
   
 
 0.905
H2XYK8_CIOIN
N-acetyltransferase domain-containing protein.
   
 
 0.843
F7AER5_CIOIN
Uncharacterized protein.
    
 0.831
LOC100184253
N-alpha-acetyltransferase 30.
     
0.828
F7BKA5_CIOIN
Uncharacterized protein.
     
 0.828
H2XQX5_CIOIN
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
   0.805
F6RU68_CIOIN
N-acetyltransferase domain-containing protein.
   
 
 0.799
LOC100176316
60S ribosomal protein L23a-like; Belongs to the universal ribosomal protein uL23 family.
   
   0.713
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (30%) [HD]