STRINGSTRING
ENSCING00000006740 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006740" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006740Uncharacterized protein (415 aa)    
Predicted Functional Partners:
ENSCING00000018007
Uncharacterized protein (233 aa)
 
          0.820
dnajc10
Uncharacterized protein (817 aa)
     
 
  0.688
ENSCING00000002572
Uncharacterized protein (731 aa)
     
   
  0.589
ENSCING00000009202
Uncharacterized protein (489 aa)
         
  0.572
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.548
ENSCING00000007699
Uncharacterized protein (983 aa)
     
   
  0.525
ENSCING00000000433
Uncharacterized protein (453 aa)
         
  0.519
ENSCING00000004966
Uncharacterized protein (396 aa)
         
  0.519
ENSCING00000024618
Uncharacterized protein (491 aa)
         
  0.462
ENSCING00000009118
Uncharacterized protein (443 aa)
           
  0.439
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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