STRINGSTRING
Cin.23358 protein (Ciona intestinalis) - STRING interaction network
"Cin.23358" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.23358Uncharacterized protein (256 aa)    
Predicted Functional Partners:
Cin.27802
Uncharacterized protein (1161 aa)
       
  0.663
ENSCING00000016470
Uncharacterized protein (607 aa)
       
  0.662
ENSCING00000006088
Uncharacterized protein (688 aa)
       
  0.662
cipc2
Similar to putative prohormone convertase 2 (660 aa)
       
  0.662
pcsk5
Uncharacterized protein (608 aa)
       
  0.662
Cin.32434
Uncharacterized protein (236 aa)
       
  0.654
ENSCING00000005511
Uncharacterized protein (758 aa)
       
  0.651
ENSCING00000005940
Uncharacterized protein (435 aa)
       
  0.644
fras1
Uncharacterized protein (3955 aa)
       
  0.639
ci-tlr2
Toll-like receptor 2 (947 aa)
       
  0.628
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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