Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Syt1Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
F7A7X6_CIOIN
V-SNARE coiled-coil homology domain-containing protein.
   
 0.996
LOC100187429
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.993
F6PHJ3_CIOIN
Uncharacterized protein; Belongs to the adaptor complexes medium subunit family.
   
 0.989
LOC100182780
Ras-related protein Rab-3.
   
 0.962
Vachtp
MFS domain-containing protein.
     
 0.961
F6Y321_CIOIN
t-SNARE coiled-coil homology domain-containing protein.
   
 0.958
vglut
MFS domain-containing protein.
   
 
 0.953
syn
Uncharacterized protein.
   
 0.950
H2XRZ3_CIOIN
t-SNARE coiled-coil homology domain-containing protein.
   
 0.948
vgat
Aa_trans domain-containing protein.
   
 
 0.930
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.