STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6YAQ4_CIOINUncharacterized protein. (240 aa)    
Predicted Functional Partners:
F6XLX0_CIOIN
Uncharacterized protein.
   
 
 0.928
LOC100182613
Uncharacterized protein.
   
 
 0.747
Fgf9/16/20
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.714
LOC100187291
Uncharacterized protein LOC100187291.
   
 
 0.694
F6XGL3_CIOIN
Non-specific serine/threonine protein kinase.
   
  
 0.686
F6QZW7_CIOIN
IRS-type PTB domain-containing protein.
    
 0.656
fgf3/7/10/22
Fibroblast growth factor 3/7/10/22; Belongs to the heparin-binding growth factors family.
    
 0.652
F6S6B2_CIOIN
Phosphoinositide phospholipase C.
    
 0.539
H2XNU4_CIOIN
Uncharacterized protein.
      
 0.537
F6TAP2_CIOIN
Cyclic nucleotide-binding domain-containing protein.
      
 0.535
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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