STRINGSTRING
ENSCING00000006906 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006906" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006906Uncharacterized protein (621 aa)    
Predicted Functional Partners:
ENSCING00000003483
Uncharacterized protein (511 aa)
     
  0.939
ENSCING00000017649
Uncharacterized protein (486 aa)
     
  0.925
clp1
Uncharacterized protein ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (430 aa)
     
  0.883
ENSCING00000021080
Uncharacterized protein (262 aa)
     
  0.880
papolg
Uncharacterized protein (536 aa)
     
  0.828
ENSCING00000020318
Ziinc finger protein Ci-ZF(C3H)-7 (977 aa)
     
  0.823
ENSCING00000007331
Uncharacterized protein (563 aa)
     
  0.777
Cin.31589
Uncharacterized protein (222 aa)
     
  0.777
ENSCING00000008006
Uncharacterized protein (479 aa)
   
 
0.735
ENSCING00000006985
Uncharacterized protein (852 aa)
     
 
    0.715
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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