STRINGSTRING
nfkbp105 protein (Ciona intestinalis) - STRING interaction network
"nfkbp105" - NFkB protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfkbp105NFkB protein (1202 aa)    
Predicted Functional Partners:
ENSCING00000011366
IkappaB kinase; Uncharacterized protein (172 aa)
       
  0.992
ikappab
IkappaB protein (371 aa)
     
0.978
rel1
Rel1 protein (706 aa)
     
0.969
bcl3
Uncharacterized protein (1017 aa)
     
0.958
ENSCING00000009957
Uncharacterized protein (87 aa)
     
 
  0.792
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.785
ENSCING00000012576
Uncharacterized protein (666 aa)
       
  0.744
ENSCING00000005522
Uncharacterized protein (720 aa)
       
  0.734
rps6ka5
Uncharacterized protein (813 aa)
     
  0.720
ENSCING00000022452
Uncharacterized protein (139 aa)
     
  0.718
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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