STRINGSTRING
sec23ip protein (Ciona intestinalis) - STRING interaction network
"sec23ip" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec23ipUncharacterized protein (1009 aa)    
Predicted Functional Partners:
ENSCING00000014739
Uncharacterized protein (181 aa)
     
 
  0.652
ENSCING00000005800
Uncharacterized protein (967 aa)
     
 
  0.625
sec24c
Uncharacterized protein (914 aa)
     
 
  0.625
ENSCING00000009600
Uncharacterized protein (214 aa)
     
 
    0.619
Cin.23493
Uncharacterized protein (126 aa)
         
  0.618
ENSCING00000004004
Uncharacterized protein (442 aa)
     
 
    0.616
ENSCING00000002557
Uncharacterized protein (312 aa)
         
  0.607
ENSCING00000023081
Uncharacterized protein (204 aa)
       
    0.607
ENSCING00000007400
Uncharacterized protein (226 aa)
     
 
    0.597
ENSCING00000014770
Uncharacterized protein (262 aa)
     
 
    0.592
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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