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zf(ubp)-1 protein (Ciona intestinalis) - STRING interaction network
"zf(ubp)-1" - Ubiquitin carboxyl-terminal hydrolase in Ciona intestinalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(ubp)-1Ubiquitin carboxyl-terminal hydrolase (825 aa)    
Predicted Functional Partners:
ENSCING00000020815
Uncharacterized protein (347 aa)
     
  0.895
ENSCING00000007605
Uncharacterized protein (381 aa)
     
  0.895
ENSCING00000024111
Uncharacterized protein (315 aa)
     
  0.855
ENSCING00000012574
Uncharacterized protein (171 aa)
     
  0.855
zf(an1)-3
Uncharacterized protein (608 aa)
     
  0.855
ENSCING00000007440
Uncharacterized protein (313 aa)
     
  0.764
r27a
R27a protein (155 aa)
     
  0.749
ENSCING00000008368
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from t [...] (410 aa)
     
 
  0.713
ENSCING00000005628
Uncharacterized protein (714 aa)
     
  0.705
ENSCING00000021990
Uncharacterized protein (216 aa)
     
   
  0.681
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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