Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F7BIB7_CIOINProtein kinase domain-containing protein. (316 aa)    
Predicted Functional Partners:
F6SBE5_CIOIN
Uncharacterized protein.
 
 
 
 0.910
H2XVV8_CIOIN
DH domain-containing protein.
 
  
  0.888
LOC100187178
Myosin regulatory light chain 12A.
    
 0.668
ck2a
Casein kinase 2 alpha subunit; Belongs to the protein kinase superfamily.
    
 
 0.659
LOC100187260
2-acylglycerol O-acyltransferase 1.
   
  
 0.658
F6WJQ0_CIOIN
Ribosomal_L16 domain-containing protein.
    
 
 0.646
irf-like-3
IRF tryptophan pentad repeat domain-containing protein.
      
 0.630
F7A6C5_CIOIN
ANK_REP_REGION domain-containing protein.
    
 
 0.621
LOC100178703
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 
0.548
erk1/2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.544
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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