STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7AEK6_CIOINPeptidase_M48 domain-containing protein. (421 aa)    
Predicted Functional Partners:
F7B997_CIOIN
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.739
LOC100187058
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.683
F6VDC4_CIOIN
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.645
F6Y8H4_CIOIN
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 
 0.631
LOC100184780
CAAX prenyl protease 2-like.
    
 
 0.615
F6T949_CIOIN
Peptidase_M41 domain-containing protein.
  
 
 0.608
H2XZJ5_CIOIN
AAA domain-containing protein.
  
 
 0.608
LOC100183218
10 kDa heat shock protein, mitochondrial-like; Belongs to the GroES chaperonin family.
  
  
 0.600
LOC100176674
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
      
 0.555
F7AHK4_CIOIN
AAA domain-containing protein.
  
 
 0.549
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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