STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6W9J4_CIOINUncharacterized protein; Belongs to the alkaline phosphatase family. (315 aa)    
Predicted Functional Partners:
F6ZZK5_CIOIN
Alkaline phosphatase.
 
     0.951
F7B4P8_CIOIN
GTP_cyclohydroI domain-containing protein.
     
  0.900
LOC100183853
6-pyruvoyl tetrahydrobiopterin synthase-like.
     
  0.900
LOC100177271
Uncharacterized protein.
   
 
 0.416
LOC100183539
Phosphoserine aminotransferase.
     
 0.415
LOC100181174
Uncharacterized protein.
     
  0.410
F7AZD3_CIOIN
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
  0.410
F6PZE7_CIOIN
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
     
  0.408
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.