STRINGSTRING
ENSCING00000007079 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007079" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007079Uncharacterized protein (460 aa)    
Predicted Functional Partners:
nmd3
Uncharacterized protein (501 aa)
     
 
  0.975
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.962
ENSCING00000013374
Uncharacterized protein (177 aa)
     
 
  0.934
ENSCING00000001858
Uncharacterized protein (225 aa)
     
 
  0.934
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
 
  0.920
ENSCING00000004262
Uncharacterized protein (394 aa)
     
 
  0.912
ENSCING00000013996
Uncharacterized protein (582 aa)
     
 
  0.910
ENSCING00000011810
Uncharacterized protein (225 aa)
     
 
  0.898
ENSCING00000025069
Uncharacterized protein ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (736 aa)
     
 
  0.888
ENSCING00000003181
Uncharacterized protein (1061 aa)
     
   
  0.885
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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