STRINGSTRING
erk1/2 protein (Ciona intestinalis) - STRING interaction network
"erk1/2" - Mitogen-activated protein kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erk1/2Mitogen-activated protein kinase (350 aa)    
Predicted Functional Partners:
mapkk1/2
Mitogen-activated protein kinase kinase (377 aa)
   
0.996
rps6ka3
Ribosomal protein S6 kinase (730 aa)
     
0.975
ENSCING00000008202
Uncharacterized protein (361 aa)
   
0.975
ENSCING00000005739
Transcription factor protein (761 aa)
       
  0.967
ENSCING00000020647
Uncharacterized protein (143 aa)
       
  0.958
ENSCING00000012576
Uncharacterized protein (666 aa)
     
  0.943
ENSCING00000007986
Dual specificity phosphatase (434 aa)
     
  0.936
dusp8.16
Dual specificity phosphatase (750 aa)
     
  0.929
mapkk5
Uncharacterized protein (458 aa)
   
0.924
dusp6.9
Dual specificity phosphatase (499 aa)
       
  0.914
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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