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ckm protein (Ciona intestinalis) - STRING interaction network
"ckm" - Creatine kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ckmCreatine kinase (377 aa)    
Predicted Functional Partners:
gamt1
Guanidinoacetate methyltransferase-1 (235 aa)
         
  0.900
ENSCING00000014902
Uncharacterized protein (232 aa)
         
  0.900
ENSCING00000008838
Uncharacterized protein (362 aa)
   
 
0.892
actn2
Uncharacterized protein (927 aa)
     
 
  0.741
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
      0.522
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
       
      0.522
ENSCING00000008967
Uncharacterized protein (418 aa)
     
 
  0.496
ENSCING00000023796
Uncharacterized protein (347 aa)
     
 
  0.496
ctm1
Tropomyosin, smooth muscle/fibroblast CTM1 ; The function of tropomyosin in smooth muscle and non- muscle cells is not clear (284 aa)
     
 
  0.436
ENSCING00000002238
Phosphoglycerate kinase (416 aa)
     
 
  0.431
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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