STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100184014Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (455 aa)    
Predicted Functional Partners:
LOC100186064
Serine/threonine-protein phosphatase.
   
 0.964
F6T957_CIOIN
Uncharacterized protein.
    
 0.963
F6T283_CIOIN
Uncharacterized protein.
    
 0.935
F6V7V9_CIOIN
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
 0.928
F6R0X3_CIOIN
EF-hand domain-containing protein.
    
 0.927
F6UTA2_CIOIN
Uncharacterized protein.
    
 0.923
H2XRC5_CIOIN
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
 0.923
F6WGS7_CIOIN
Uncharacterized protein.
 
 
    0.889
H2XWR4_CIOIN
A_deaminase domain-containing protein.
 
    
 0.832
H2XVY7_CIOIN
Uncharacterized protein.
    
 
 0.770
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.