F6UVN7_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6UVN7_CIOIN

Uncharacterized protein. (227 aa)

Predicted Functional Partners:

rtn

0.755

F6YRX9_CIOIN

0.703

LOC100187137

0.693

F6ZU53_CIOIN

0.656

H2XYB4_CIOIN

0.586

F6R8L5_CIOIN

0.559

LOC100180959

0.555

LOC100179729

0.542

LOC100180439

0.540

LOC100186615

0.520

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6R8L5_CIOIN	F6UVN7_CIOIN	ENSCINP00000006011	ENSCINP00000014872	Uncharacterized protein.	Uncharacterized protein.	0.559
F6R8L5_CIOIN	LOC100179729	ENSCINP00000006011	ENSCINP00000021742	Uncharacterized protein.	Protein FAM8A1-like.	0.950
F6UVN7_CIOIN	F6R8L5_CIOIN	ENSCINP00000014872	ENSCINP00000006011	Uncharacterized protein.	Uncharacterized protein.	0.559
F6UVN7_CIOIN	F6YRX9_CIOIN	ENSCINP00000014872	ENSCINP00000014755	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.703
F6UVN7_CIOIN	F6ZU53_CIOIN	ENSCINP00000014872	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.656
F6UVN7_CIOIN	H2XYB4_CIOIN	ENSCINP00000014872	ENSCINP00000034648	Uncharacterized protein.	Nucleoporin_C domain-containing protein.	0.586
F6UVN7_CIOIN	LOC100179729	ENSCINP00000014872	ENSCINP00000021742	Uncharacterized protein.	Protein FAM8A1-like.	0.542
F6UVN7_CIOIN	LOC100180439	ENSCINP00000014872	ENSCINP00000002779	Uncharacterized protein.	Transmembrane protein 43.	0.540
F6UVN7_CIOIN	LOC100180959	ENSCINP00000014872	ENSCINP00000001330	Uncharacterized protein.	Receptor expression-enhancing protein.	0.555
F6UVN7_CIOIN	LOC100186615	ENSCINP00000014872	ENSCINP00000023958	Uncharacterized protein.	Transmembrane emp24 domain-containing protein 1-like isoform X2.	0.520
F6UVN7_CIOIN	LOC100187137	ENSCINP00000014872	ENSCINP00000013102	Uncharacterized protein.	Cilia- and flagella-associated protein 299.	0.693
F6UVN7_CIOIN	rtn	ENSCINP00000014872	ENSCINP00000011832	Uncharacterized protein.	Reticulon-like protein.	0.755
F6YRX9_CIOIN	F6UVN7_CIOIN	ENSCINP00000014755	ENSCINP00000014872	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.703
F6ZU53_CIOIN	F6UVN7_CIOIN	ENSCINP00000021895	ENSCINP00000014872	Uncharacterized protein.	Uncharacterized protein.	0.656
F6ZU53_CIOIN	LOC100187137	ENSCINP00000021895	ENSCINP00000013102	Uncharacterized protein.	Cilia- and flagella-associated protein 299.	0.654
H2XYB4_CIOIN	F6UVN7_CIOIN	ENSCINP00000034648	ENSCINP00000014872	Nucleoporin_C domain-containing protein.	Uncharacterized protein.	0.586
LOC100179729	F6R8L5_CIOIN	ENSCINP00000021742	ENSCINP00000006011	Protein FAM8A1-like.	Uncharacterized protein.	0.950
LOC100179729	F6UVN7_CIOIN	ENSCINP00000021742	ENSCINP00000014872	Protein FAM8A1-like.	Uncharacterized protein.	0.542
LOC100179729	LOC100186615	ENSCINP00000021742	ENSCINP00000023958	Protein FAM8A1-like.	Transmembrane emp24 domain-containing protein 1-like isoform X2.	0.584
LOC100180439	F6UVN7_CIOIN	ENSCINP00000002779	ENSCINP00000014872	Transmembrane protein 43.	Uncharacterized protein.	0.540