STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6U7R9_CIOINUncharacterized protein. (1408 aa)    
Predicted Functional Partners:
F6YFV6_CIOIN
HMA domain-containing protein.
  
 0.993
H2XXK2_CIOIN
HMA domain-containing protein.
    
 0.977
F6V725_CIOIN
PDZ domain-containing protein.
    
 0.755
F6ZU53_CIOIN
Uncharacterized protein.
  
 
 0.696
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.685
F6VMS4_CIOIN
Uncharacterized protein.
  
 
 0.684
LOC100182293
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.676
LOC100182021
TIP41-like protein.
  
 
 0.654
LOC100175647
Porphobilinogen deaminase.
  
  
 0.652
LOC100185391
Cytochrome c oxidase copper chaperone.
      
 0.642
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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