Pellino protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

Pellino

Uncharacterized protein. (453 aa)

Predicted Functional Partners:

Q1RPY5_CIOIN

0.809

F6YIF4_CIOIN

0.807

F7A9Z4_CIOIN

0.787

LOC100184240

0.783

F6SYE0_CIOIN

0.669

F7B012_CIOIN

0.665

Q4H3C1_CIOIN

0.549

asak

0.540

cdc45

0.540

net1a

0.531

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SYE0_CIOIN	LOC100184240	ENSCINP00000026311	ENSCINP00000006560	Protein kinase domain-containing protein.	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	0.716
F6SYE0_CIOIN	Pellino	ENSCINP00000026311	ENSCINP00000014904	Protein kinase domain-containing protein.	Uncharacterized protein.	0.669
F6SYE0_CIOIN	Q1RPY5_CIOIN	ENSCINP00000026311	ENSCINP00000030768	Protein kinase domain-containing protein.	Zinc finger protein.	0.808
F6SYE0_CIOIN	Q4H3C1_CIOIN	ENSCINP00000026311	ENSCINP00000021745	Protein kinase domain-containing protein.	IkappaB kinase.	0.643
F6YIF4_CIOIN	LOC100184240	ENSCINP00000015329	ENSCINP00000006560	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	0.634
F6YIF4_CIOIN	Pellino	ENSCINP00000015329	ENSCINP00000014904	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.807
F6YIF4_CIOIN	Q1RPY5_CIOIN	ENSCINP00000015329	ENSCINP00000030768	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Zinc finger protein.	0.871
F6YIF4_CIOIN	Q4H3C1_CIOIN	ENSCINP00000015329	ENSCINP00000021745	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	IkappaB kinase.	0.429
F7A9Z4_CIOIN	LOC100184240	ENSCINP00000016221	ENSCINP00000006560	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	0.622
F7A9Z4_CIOIN	Pellino	ENSCINP00000016221	ENSCINP00000014904	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.787
F7A9Z4_CIOIN	Q1RPY5_CIOIN	ENSCINP00000016221	ENSCINP00000030768	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Zinc finger protein.	0.764
F7B012_CIOIN	LOC100184240	ENSCINP00000002039	ENSCINP00000006560	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	0.998
F7B012_CIOIN	Pellino	ENSCINP00000002039	ENSCINP00000014904	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.665
F7B012_CIOIN	Q1RPY5_CIOIN	ENSCINP00000002039	ENSCINP00000030768	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Zinc finger protein.	0.682
F7B012_CIOIN	Q4H3C1_CIOIN	ENSCINP00000002039	ENSCINP00000021745	UBIQUITIN_CONJUGAT_2 domain-containing protein.	IkappaB kinase.	0.599
LOC100184240	F6SYE0_CIOIN	ENSCINP00000006560	ENSCINP00000026311	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein.	0.716
LOC100184240	F6YIF4_CIOIN	ENSCINP00000006560	ENSCINP00000015329	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.634
LOC100184240	F7A9Z4_CIOIN	ENSCINP00000006560	ENSCINP00000016221	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.622
LOC100184240	F7B012_CIOIN	ENSCINP00000006560	ENSCINP00000002039	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.998
LOC100184240	Pellino	ENSCINP00000006560	ENSCINP00000014904	Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.783