Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6SUV6_CIOINMyotubularin phosphatase domain-containing protein. (223 aa)    
Predicted Functional Partners:
LOC100181041
Myotubularin-related protein 9 isoform X1.
   
 0.994
LOC100182691
SAC domain-containing protein.
   
 
 0.948
H2XRY3_CIOIN
Uncharacterized protein.
     
 0.948
LOC100182371
Uncharacterized protein.
  
 
0.944
H2XJF2_CIOIN
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.939
F6YQ60_CIOIN
SAC domain-containing protein.
     
 0.932
H2Y1I5_CIOIN
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.929
F7AAA7_CIOIN
PI3K/PI4K domain-containing protein.
     
 0.916
F6QH36_CIOIN
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.915
F7BIS1_CIOIN
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.910
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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