STRINGSTRING
cand1 protein (Ciona intestinalis) - STRING interaction network
"cand1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cand1Uncharacterized protein (1277 aa)    
Predicted Functional Partners:
ENSCING00000006501
Uncharacterized protein (778 aa)
     
 
  0.966
ENSCING00000023849
Uncharacterized protein (145 aa)
     
 
  0.939
ENSCING00000007224
Uncharacterized protein (294 aa)
     
 
  0.939
cul2
Uncharacterized protein (744 aa)
     
 
  0.824
ENSCING00000002955
Uncharacterized protein (707 aa)
     
 
  0.803
cul4a
Uncharacterized protein (614 aa)
     
 
  0.803
Cin.53224
Uncharacterized protein (133 aa)
     
 
  0.802
ENSCING00000003077
Uncharacterized protein (363 aa)
     
 
  0.802
xpo1
Uncharacterized protein (1071 aa)
     
      0.600
ipo5
Uncharacterized protein (1110 aa)
     
      0.551
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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