xbpd protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

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[Homology]

Score

xbpd

Transcription factor protein isoform X1. (366 aa)

Predicted Functional Partners:

F6SBH8_CIOIN

0.806

LOC100179323

0.644

LOC494394

0.626

atf4/5

0.606

LOC100180800

0.601

LOC100178512

0.593

LOC100186609

0.567

LOC101242470

0.567

H2XRR7_CIOIN

0.560

F7B397_CIOIN

0.534

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SBH8_CIOIN	F7B397_CIOIN	ENSCINP00000026339	ENSCINP00000005300	Uncharacterized protein.	Uncharacterized protein.	0.699
F6SBH8_CIOIN	LOC100178512	ENSCINP00000026339	ENSCINP00000031474	Uncharacterized protein.	Mesencephalic astrocyte-derived neurotrophic factor homolog.	0.660
F6SBH8_CIOIN	LOC100179323	ENSCINP00000026339	ENSCINP00000006134	Uncharacterized protein.	J domain-containing protein.	0.735
F6SBH8_CIOIN	LOC100180800	ENSCINP00000026339	ENSCINP00000019020	Uncharacterized protein.	dnaJ homolog subfamily C member 3.	0.515
F6SBH8_CIOIN	LOC100186609	ENSCINP00000026339	ENSCINP00000019205	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.929
F6SBH8_CIOIN	LOC101242470	ENSCINP00000026339	ENSCINP00000019494	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.929
F6SBH8_CIOIN	LOC494394	ENSCINP00000026339	ENSCINP00000035480	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.682
F6SBH8_CIOIN	atf4/5	ENSCINP00000026339	ENSCINP00000022333	Uncharacterized protein.	Transcription factor protein.	0.819
F6SBH8_CIOIN	xbpd	ENSCINP00000026339	ENSCINP00000015310	Uncharacterized protein.	Transcription factor protein isoform X1.	0.806
F7B397_CIOIN	F6SBH8_CIOIN	ENSCINP00000005300	ENSCINP00000026339	Uncharacterized protein.	Uncharacterized protein.	0.699
F7B397_CIOIN	LOC100179323	ENSCINP00000005300	ENSCINP00000006134	Uncharacterized protein.	J domain-containing protein.	0.873
F7B397_CIOIN	LOC100186609	ENSCINP00000005300	ENSCINP00000019205	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.938
F7B397_CIOIN	LOC101242470	ENSCINP00000005300	ENSCINP00000019494	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.938
F7B397_CIOIN	LOC494394	ENSCINP00000005300	ENSCINP00000035480	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.886
F7B397_CIOIN	xbpd	ENSCINP00000005300	ENSCINP00000015310	Uncharacterized protein.	Transcription factor protein isoform X1.	0.534
H2XRR7_CIOIN	LOC100178512	ENSCINP00000032351	ENSCINP00000031474	J domain-containing protein.	Mesencephalic astrocyte-derived neurotrophic factor homolog.	0.450
H2XRR7_CIOIN	LOC100186609	ENSCINP00000032351	ENSCINP00000019205	J domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.900
H2XRR7_CIOIN	LOC101242470	ENSCINP00000032351	ENSCINP00000019494	J domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.900
H2XRR7_CIOIN	LOC494394	ENSCINP00000032351	ENSCINP00000035480	J domain-containing protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.667
H2XRR7_CIOIN	xbpd	ENSCINP00000032351	ENSCINP00000015310	J domain-containing protein.	Transcription factor protein isoform X1.	0.560