STRINGSTRING
sec31a protein (Ciona intestinalis) - STRING interaction network
"sec31a" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec31aUncharacterized protein (1205 aa)    
Predicted Functional Partners:
sec23a
Uncharacterized protein (772 aa)
     
  0.999
ENSCING00000002557
Uncharacterized protein (312 aa)
     
  0.998
ENSCING00000005800
Uncharacterized protein (967 aa)
     
  0.995
sec24c
Uncharacterized protein (914 aa)
     
  0.995
ENSCING00000005807
Uncharacterized protein (192 aa)
     
  0.993
ENSCING00000001739
Uncharacterized protein ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1635 aa)
     
 
  0.896
ENSCING00000014028
Uncharacterized protein (350 aa)
     
 
  0.895
ENSCING00000000693
Uncharacterized protein (677 aa)
     
 
  0.765
ENSCING00000002570
Uncharacterized protein (275 aa)
     
 
  0.753
ENSCING00000007307
Uncharacterized protein (590 aa)
     
 
  0.749
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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